run PCA on given coordinates

run.PCA(coords, corr = FALSE, ignoreCache = FALSE,
  additional_params = NULL)

Arguments

coords
Filename of coordinates.
corr
Perform PCA on correlations instead of covariance. default: FALSE.
ignoreCache
Recompute, even if output files already exist. default: FALSE.
additional_params
Vector with additional parameters for 'fastpca'. default: NULL.