clustering  0.12
Clustering suite for molecular dynamics trajectories.
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Clustering Namespace Reference

general namespace for clustering package More...

Namespaces

 Density
 namespace for density-based clustering functions
 
 Filter
 functionality for filtering coordinates or order parameters (ASCII or GROMACS' .xtc) based on state trajectory.
 
 MPP
 functions related to "Most Probable Path"-clustering
 
 NetworkBuilder
 functions for network creation from free energy screening
 
 Tools
 additional tools used throughout the clustering package
 

Functions

std::ostream devnull (0)
 
std::ostream & logger (std::ostream &s)
 
std::ostream & debug ()
 print formatted debug output to std::cerr.
 

Variables

bool verbose = false
 global flag: use verbose output?
 
std::ostream devnull
 fake-stream used as output if nothing should be printed to stdout/stderr.
 

Detailed Description

general namespace for clustering package

Function Documentation

std::ostream & Clustering::logger ( std::ostream &  s)

logger, use like logger(std::cout) << ...; will print to given stream if global 'verbose' is set to true.

Definition at line 32 of file logger.cpp.